omnipath.requests.Intercell

class omnipath.requests.Intercell

Request intercell annotations from [OmniPath].

Imports the [OmniPath] inter-cellular communication role annotation database.

It provides information on the roles in inter-cellular signaling, e.g. if a protein is a ligand, a receptor, an extracellular matrix (ECM) component, etc.

Methods

categories()	Return categories from the intercell database.
generic_categories()	Return generic categories from the intercell database.
get(**kwargs)	Perform a request to the [OmniPath] web service.
params()	Return the available values for each parameter, if available.
resources([generic_categories])	Return the resources falling into the specified generic categories.