API
Import Omnipath as:
import omnipath as op
Requests
Request annotations from [OmniPath]. |
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Request information about protein complexes from [OmniPath]. |
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Request enzyme-substrate relationships from [OmniPath]. |
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Request intercell annotations from [OmniPath]. |
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Request enzyme-substrate relationships and interactions from [OmniPath]. |
Interactions
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Request all [OmniPath] interaction datasets. |
Request interactions from the dorothea dataset. |
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Request interactions from the kinase extra dataset. |
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Request interactions from the ligrec extra dataset. |
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Request interactions from the omnipath dataset. |
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Request interactions from the pathway extra dataset. |
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Request all post-translational interactions from [OmniPath] . |
Request interactions from the TF-miRNA dataset. |
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Request interactions from the TF-target dataset. |
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Request all TF-target interactions from [OmniPath]. |
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Request interactions from the lncRNA-mRNA dataset. |
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Request interactions from the miRNA-target dataset. |
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Import intercellular network combining intercellular annotations and protein interactions. |
Other
Constants
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Available interaction datasets in [OmniPath]. |
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License types. |
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Organism types. |
Options
Remove all cached data from |
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Class defining various |