omnipath.interactions.PostTranslational

class omnipath.interactions.PostTranslational(exclude=None)

Request all post-translational interactions from [OmniPath] .

Imports the dataset which contains post-transcriptional (i.e. protein-protein) interactions. This query requests the interactions from the following datasets:

• omnipath.constants.InteractionDataset.OMNIPATH

• omnipath.constants.InteractionDataset.PATHWAY_EXTRA

• omnipath.constants.InteractionDataset.KINASE_EXTRA

• omnipath.constants.InteractionDataset.LIGREC_EXTRA

Parameters:

exclude (Union[str, InteractionDataset, Sequence[str], Sequence[InteractionDataset], None]) – Post-translational interaction datasets to exclude. If None, don’t exclude anything.

Methods

get([exclude])	Perform a request to the [OmniPath] web service.
graph([data])	Create a graph.
params()	Return the available values for each parameter, if available.
resources(**kwargs)	Return the available resources for this query.