omnipath.interactions.AllInteractions

class omnipath.interactions.AllInteractions(include=None, exclude=None)

Request all [OmniPath] interaction datasets.

The available interaction datasets are omnipath.constants.InteractionDataset.

Parameters:

• include (Union[str, InteractionDataset, Sequence[str], Sequence[InteractionDataset], None]) – Interactions datasets to include from the [OmniPath] database. If None, include everything.

• exclude (Union[str, InteractionDataset, Sequence[str], Sequence[InteractionDataset], None]) – Interaction datasets to exclude from the [OmniPath] database. If None, don’t exclude anything.

Methods

get([include, exclude])	Perform a request to the [OmniPath] web service.
graph([data])	Create a graph.
params()	Return the available values for each parameter, if available.
resources(**kwargs)	Return the available resources for this query.