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omnipath
Index
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Index
A
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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R
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S
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T
A
ACADEMIC (omnipath.constants.License attribute)
AllInteractions (class in omnipath.interactions)
Annotations (class in omnipath.requests)
C
categories() (omnipath.requests.Intercell class method)
clear_cache() (in module omnipath)
code (omnipath.constants.Organism property)
COLLECTRI (omnipath.constants.InteractionDataset attribute)
COMMERCIAL (omnipath.constants.License attribute)
complex_genes() (omnipath.requests.Complexes class method)
Complexes (class in omnipath.requests)
D
Dorothea (class in omnipath.interactions)
DOROTHEA (omnipath.constants.InteractionDataset attribute)
E
Enzsub (class in omnipath.requests)
F
FOR_PROFIT (omnipath.constants.License attribute)
G
generic_categories() (omnipath.requests.Intercell class method)
get() (omnipath.interactions.AllInteractions class method)
(omnipath.interactions.Dorothea class method)
(omnipath.interactions.KinaseExtra class method)
(omnipath.interactions.LigRecExtra class method)
(omnipath.interactions.lncRNAmRNA class method)
(omnipath.interactions.miRNA class method)
(omnipath.interactions.OmniPath class method)
(omnipath.interactions.PathwayExtra class method)
(omnipath.interactions.PostTranslational class method)
(omnipath.interactions.TFmiRNA class method)
(omnipath.interactions.TFtarget class method)
(omnipath.interactions.Transcriptional class method)
(omnipath.requests.Annotations class method)
(omnipath.requests.Complexes class method)
(omnipath.requests.Enzsub class method)
(omnipath.requests.Intercell class method)
(omnipath.requests.SignedPTMs class method)
graph() (omnipath.interactions.AllInteractions class method)
(omnipath.interactions.Dorothea class method)
(omnipath.interactions.KinaseExtra class method)
(omnipath.interactions.LigRecExtra class method)
(omnipath.interactions.lncRNAmRNA class method)
(omnipath.interactions.miRNA class method)
(omnipath.interactions.OmniPath class method)
(omnipath.interactions.PathwayExtra class method)
(omnipath.interactions.PostTranslational class method)
(omnipath.interactions.TFmiRNA class method)
(omnipath.interactions.TFtarget class method)
(omnipath.interactions.Transcriptional class method)
(omnipath.requests.SignedPTMs class method)
H
HUMAN (omnipath.constants.Organism attribute)
I
IGNORE (omnipath.constants.License attribute)
import_intercell_network() (in module omnipath.interactions)
InteractionDataset (class in omnipath.constants)
Intercell (class in omnipath.requests)
K
KINASE_EXTRA (omnipath.constants.InteractionDataset attribute)
KinaseExtra (class in omnipath.interactions)
L
License (class in omnipath.constants)
LIGREC_EXTRA (omnipath.constants.InteractionDataset attribute)
LigRecExtra (class in omnipath.interactions)
LNCRNA_MRNA (omnipath.constants.InteractionDataset attribute)
lncRNAmRNA (class in omnipath.interactions)
M
miRNA (class in omnipath.interactions)
MIRNA_TARGET (omnipath.constants.InteractionDataset attribute)
MOUSE (omnipath.constants.Organism attribute)
N
NON_PROFIT (omnipath.constants.License attribute)
O
OmniPath (class in omnipath.interactions)
OMNIPATH (omnipath.constants.InteractionDataset attribute)
options (in module omnipath)
Organism (class in omnipath.constants)
P
params() (omnipath.interactions.AllInteractions class method)
(omnipath.interactions.Dorothea class method)
(omnipath.interactions.KinaseExtra class method)
(omnipath.interactions.LigRecExtra class method)
(omnipath.interactions.lncRNAmRNA class method)
(omnipath.interactions.miRNA class method)
(omnipath.interactions.OmniPath class method)
(omnipath.interactions.PathwayExtra class method)
(omnipath.interactions.PostTranslational class method)
(omnipath.interactions.TFmiRNA class method)
(omnipath.interactions.TFtarget class method)
(omnipath.interactions.Transcriptional class method)
(omnipath.requests.Annotations class method)
(omnipath.requests.Complexes class method)
(omnipath.requests.Enzsub class method)
(omnipath.requests.Intercell class method)
(omnipath.requests.SignedPTMs class method)
PATHWAY_EXTRA (omnipath.constants.InteractionDataset attribute)
PathwayExtra (class in omnipath.interactions)
pivot_annotations() (omnipath.requests.Annotations class method)
PostTranslational (class in omnipath.interactions)
R
RAT (omnipath.constants.Organism attribute)
resources() (omnipath.interactions.AllInteractions class method)
(omnipath.interactions.Dorothea class method)
(omnipath.interactions.KinaseExtra class method)
(omnipath.interactions.LigRecExtra class method)
(omnipath.interactions.lncRNAmRNA class method)
(omnipath.interactions.miRNA class method)
(omnipath.interactions.OmniPath class method)
(omnipath.interactions.PathwayExtra class method)
(omnipath.interactions.PostTranslational class method)
(omnipath.interactions.TFmiRNA class method)
(omnipath.interactions.TFtarget class method)
(omnipath.interactions.Transcriptional class method)
(omnipath.requests.Annotations class method)
(omnipath.requests.Complexes class method)
(omnipath.requests.Enzsub class method)
(omnipath.requests.Intercell class method)
(omnipath.requests.SignedPTMs class method)
S
SignedPTMs (class in omnipath.requests)
SMALL_MOLECULE (omnipath.constants.InteractionDataset attribute)
T
TF_MIRNA (omnipath.constants.InteractionDataset attribute)
TF_REGULONS (omnipath.constants.InteractionDataset attribute)
TF_TARGET (omnipath.constants.InteractionDataset attribute)
TFmiRNA (class in omnipath.interactions)
TFtarget (class in omnipath.interactions)
Transcriptional (class in omnipath.interactions)
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